Functional Clusters

Cluster information

  • Cluster identifier CH_ath_18
  • Chromosome Chr3
  • E-value 6.49206e-16
  • Data type MapMan
  • Data identifier 19.2.2.1.4.4.4
  • Data description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)
  • Overview Clusters table overview
    Clusters chromosomal overview

Gene Family Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM05M000417 673 28 12 50
HOM05M001095 299 7 1 53
HOM05M001929 184 144 1 9

Gene Information

In cluster Gene id Gene type Gene family
X AT3G00790 RNA gene
X AT3G07155 RNA gene
X AT3G07165 RNA gene
V AT3G45460 Coding gene HOM05M000417
V AT3G45470 Coding gene HOM05M000417
V AT3G45480 Coding gene HOM05M000417
X AT3G45490 Coding gene HOM05M000417
X AT3G45500 Coding gene HOM05M000417
V AT3G45510 Coding gene HOM05M000417
X AT3G45520 Transposon
X AT3G45525 Coding gene HOM05M000417
X AT3G45530 Coding gene HOM05M001929
V AT3G45540 Coding gene HOM05M000417
X AT3G45550 Transposon
V AT3G45555 Coding gene HOM05M000417
X AT3G45560 Coding gene HOM05M000417
V AT3G45570 Coding gene HOM05M000417
X AT3G45577 Coding gene HOM05M001095
V AT3G45580 Coding gene HOM05M000417
X AT3TE67610 Transposon
X AT3TE67615 Transposon
X AT3TE67630 Transposon
X AT3TE67635 Transposon
X AT3TE67640 Transposon
X AT3TE67645 Transposon
X AT3TE67650 Transposon
X AT3TE67655 Transposon
X AT3TE67660 Transposon
X AT3TE67665 Transposon
X AT3TE67675 Transposon
X AT3TE67680 Transposon
X AT3TE67685 Transposon
X AT3TE67690 Transposon
X AT3TE67695 Transposon
X AT3TE67700 Transposon
X AT3TE67705 Transposon
X AT3TE67710 Transposon
X AT3TE67715 Transposon
X AT3TE67720 Transposon
X AT3TE67725 Transposon
X AT3TE67730 Transposon
X AT3TE67735 Transposon
X AT3TE67740 Transposon
X AT3TE67745 Transposon
X AT3TE67750 Transposon
X AT3TE67755 Transposon
X AT3TE67760 Transposon
X AT3TE67765 Transposon
X AT3TE67770 Transposon
X AT3TE67780 Transposon
X AT3TE67790 Transposon
X AT3TE67795 Transposon
X AT3TE67800 Transposon
X AT3TE67805 Transposon