Functional Clusters

Cluster information

  • Cluster identifier CH_lpe_238
  • Chromosome Lp_chr1_0
  • E-value 0.0000449054
  • Data type MapMan
  • Data identifier 19.2.2.1.4.3.3.1
  • Data description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase
  • Overview Clusters table overview
    Clusters chromosomal overview

Gene Family Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM05M000014 6208 123 4 52
HOM05M000100 1899 1679 1 18
HOM05M000016 5833 92 1 51
HOM05M000004 10640 3349 2 48
HOM05M000002 13138 5517 2 49
HOM05M002088 173 27 1 17

Gene Information

In cluster Gene id Gene type Gene family
X V3.Lp_chr1_0G13848 Coding gene HOM05M000014
X V3.Lp_chr1_0G13852 Coding gene HOM05M000100
X V3.Lp_chr1_0G13854 Coding gene HOM05M000016
X V3.Lp_chr1_0G13856 Coding gene HOM05M000014
X V3.Lp_chr1_0G13858 RNA gene
X V3.Lp_chr1_0G13864 Coding gene HOM05M000014
X V3.Lp_chr1_0G13866 Coding gene HOM05M000004
X V3.Lp_chr1_0G13868 Coding gene HOM05M000002
X V3.Lp_chr1_0G13870 Coding gene HOM05M002088
X V3.Lp_chr1_0G13872 Coding gene HOM05M000002
X V3.Lp_chr1_0G13874 Coding gene HOM05M000004
X V3.Lp_chr1_0G13876 Coding gene HOM05M000014