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Monocots PLAZA 5.0
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Program
blastn
blastp
blastx
tblastx
tblastn
Database
PLAZA Protein Sequences
PLAZA Transcript Sequences
Aegilops tauschii Genome Sequence
Allium sativum Genome Sequence
Amborella trichopoda Genome Sequence
Ananas comosus Genome Sequence
Anthoceros agrestis Genome Sequence
Arabidopsis thaliana Genome Sequence
Asparagus officinalis Genome Sequence
Brachypodium distachyon Genome Sequence
Calamus simplicifolius Genome Sequence
Cenchrus purpureus Genome Sequence
Ceratophyllum demersum Genome Sequence
Chara braunii Genome Sequence
Chlamydomonas reinhardtii Genome Sequence
Digitaria exilis Genome Sequence
Dioscorea dumetorum Genome Sequence
Elaeis guineensis Genome Sequence
Eragrostis curvula Genome Sequence
Glycine max Genome Sequence
Hordeum vulgare Genome Sequence
Lolium perenne Genome Sequence
Magnolia biondii Genome Sequence
Marchantia polymorpha Genome Sequence
Micromonas commoda Genome Sequence
Miscanthus sinensis Genome Sequence
Musa acuminata Genome Sequence
Oropetium thomaeum Genome Sequence
Oryza alta Genome Sequence
Oryza brachyantha Genome Sequence
Oryza sativa Kitaake Genome Sequence
Oryza sativa ssp. indica Genome Sequence
Oryza sativa ssp. japonica Genome Sequence
Panicum hallii Genome Sequence
Phyllostachys edulis Genome Sequence
Physcomitrium patens Genome Sequence
Populus trichocarpa Genome Sequence
Prasinoderma coloniale Genome Sequence
Saccharum spontaneum Genome Sequence
Secale cereale Genome Sequence
Selaginella moellendorffii Genome Sequence
Sequoiadendron giganteum Genome Sequence
Setaria italica Genome Sequence
Setaria viridis Genome Sequence
Solanum lycopersicum Genome Sequence
Sorghum bicolor Genome Sequence
Spirodela polyrhiza Genome Sequence
Triticum aestivum Genome Sequence
Triticum dicoccoides Genome Sequence
Triticum turgidum Genome Sequence
Vanilla planifolia Genome Sequence
Zea mays B73 Genome Sequence
Zea mays B104 Genome Sequence
Zostera marina Genome Sequence
Zoysia japonica ssp. nagirizaki Genome Sequence
Enter sequence below in
FASTA
format
>Solyc11g065160.3 ATGGGTGTAAATGAAGTTAAGTTGGAAAATTTGGAGGGAAGCTTGAATAGAAGCAATGTG ATTGATTTGAATGTGGATGCAAATGGGGATGTAGGTCATGTCTTGGAGAATGTTGGGATA AAGAACTGTTTTGACTTGAATTTAGGGCTAGACGACGTAAGTAAGAACATAAATGTTGGT GGTGGTGATGAGATGTCAAAGGAAATGACTTGCTGTTCCGGAGAAGGAGGAACCCAGGAG AAAGAGGGTAGTAGAGATACTGAGAGAATTGATGGCGGAGATGAAGAGAAGGTCCCAATG AATTTGGAGACATGTTTGACTGAGAATGAGTCAGCAAATGGCACTCTACGGGAAGTTGAG GTTCAGTTGACAACACCTGATAAGGGTACTGATGGGTTGGAAGTGCAAAATGGTGTTTTG GAGAGCTTGCCGAAGGGGAAAAGGGGTAGGAAGAAGAGGAAGCTCTTGGATGCTGGCAAA GGTGTTACAGAGACAGTGTTGAGAAGAAGTGCTCGCAGAGCGAAAATAGAATCCTCTTCT GCTGAAGATCGTGTTTCTTGTGCAGTAGTGTCTGATGCAGCGAGTGACCCACTGTTGTCT CCTGCAGTTAGTGTGGTATCAGAGGAGAAAATTATTGTATCAGGTCGTGAAGAGTTTGAA AAATCTGATATTATTCCTCCAAAGATGGATTTGCCTCCTTCTTCCAGTAGTTTAGATTTG GATGCTCTTCCTGTGCTTGATGTCTTCTCTGTCTATTCATTTTTGAGATCGTTTAGTACT TTATTATTCTTGAGCCCCTTTGAGTTGGAAGACTTTGTAGCATGCATAAAGGCAAATGCT CCTACTTTGTTGTTTGACTCTATTCATTTCTCTCTATTGCAAATACTGAGGAAGCATTTG AAATCTCTTTCAGATGAAAGTTCTGAATCTGCATCTGGTTGTCTCAGGTCTCTTAACTGG GATTTGCTGGACCTGATCACATGGCCTATCTTTATGGTTGAATATCTACTACTACATGGA TCTGAACTGAAACCGAGTTTAGATCTCCGTCATTTTAAACTATTCGAGAGGGATTACTAT AAGCAACCGGCTTCTTTGAAGATTGAAATGCTTAGGTGTCTTTGTGATGACGTGATTGAA GTAGAGGCCATACAATCAGAGCTTAACAGAAGAATTGTAGCAGCAGAGAACATGGATTTT GATCGGAATTCGAAGTCTGACAGTTCCAAGAAGAGGAGGGCTTCCATGTATGTTGCTGTA GGTTCATGCTTTAGTGAAGCAGTCGATGAGTCAACAGATTGGAATAGTGACGAATGCTGC CTCTGCAAAATGGATGGTAGCTTAATATGCTGTGATGGCTGCCCTTCTGCATACCATTCT AAGTGTGTTGGTGTTGCTAGTAGTCACTTGCCTGAGGGTGATTGGTATTGCCCTGAATGT CTGATTGACAAAAAGAGTCCGTGGTTGAATTTGGCAAAATCAATTCGAGGGGCAGAGGTA TTGGCAACTGATCTGTACGGCCGGCTATACTATAGTTGCTGTGATTACCTATTGGTGTCA GATCCATGCGAAGATGAGTTCTCACCTAAGTATTACCATAGAAATGATTTGGCTCTGGTT ATTGGGATGATGAAGTCATCACAAAAGGTTTATGGAACTGTGTTAAGTGCGATTATGAAG CTTTGGGATACAAATAGTATGGCTGCGGGTGCAAAATGTGATCCGGATACCCAGCAGAAA ACTATGCCCTCAAATTTTCTGTCATTAATTCTATCGCAACATGAAGAGAAGGTAAATGAA GGAAAGCAAGCGGAAAAGCTCTCATCATGTTCTGATGATGTGGGATATGATGAATCGGAG ACAGTTGACCCATCAATGAAAATGGGAAATATACTGCCAAGGTCGGAAGGATCAGCTGAA ATATCTCAGGTTGTTGCAGACAATCAAAATTACAAGGAGGGTGGAACTTTTGAAGATTCT AATGTTACCGCCAAAATTAAGGAGACTAGAAGACCTCTCAGGGAAAGAAAGGGCAATGAA TGTGTGGACTTGGGTCTGTCAACAACGAGCAATAAAGAAATCATGTCAGAAGAGCAGTAT GCAGAAAGTTATGTGAACTTCTATAGCTTTGCTCGAATTGCATCATCAGTTGTTGAAGAG TTAACAAAGAAATCACCTGGTAAGACTGGTCAAGATGCTAAAAAAACGGTGGATGAAATA ATCTCAGCGCAGCTGAAGGCCATATCTAGCAAATCTATCGATTTTTGCTGGCCCAATGTT CAGAATATGAAGATTGATGCTAGGAAAGAAGATTGTGGGTGGTGCATCTCTTGCAAAGTT CCGGAGTGTGAGAAGGACTGCTTGTTCATCCAGAATAGCACAGGACCTGCTCCAGAAAGT TTTTCTAGTGATGCATTGGGTGTTCATTCCAGGAGGAACAGGGAAAGCCATCTTGTTAAT GTCCTTTGCAGCATATTGAGCACTGAGGATCGTCTTCATGGACTTCTGTCAGGTCCTTGG TTGAATCCACACCACTCCCAAAATTGGCGCAAAGATGTTACTGAAGCACATGATGTAGAT ACACTGAGAGCTTTTTTGCTTACATTAGAGTCGAACTTGCGGCCTCTAGCACTTACCCCT GATTGGCTGAAGCATGTGGATTCTTTAGCCAAAATGGGCTCTGGGCATCATATCATTATC AATTCATCACGCGTTAGACACGGAATTGGCAAAAAGAAGGCTAGGCATTTGGAGCCGGAG GTGAATCCATCTTCAAATGCTGGAAGTGGTTTGAGCTTGTTTTGGTGGAGGGGGGGAAGG CTATCTCGTCGACTATTCAACTGGAAGCTATTGCCCCAATCATTGGCGCGCAAAGCTGCC CGACAAGGTGGATGTAAGAAGATACCAGACATGTTATATCCGGACAATTCAGACTTTGCC AAGAGAAATAAGTGCATAGCTTGGAGGGCTGCTGTTGAAACTTCAAGAACCGTGGAGCAA CTTGCTCTCCAGGTTAGAGATCTTGATGCTCATATTAGATGGGATGATATTGGAAACACC AATATCCTTGCAATTATAGACAAGGAATTTCAAAAAGCTGTCAGATCATTCAAGAAAGCT ACTGTACGCAAGAAAAGCTCGGAAGGATCTGTAGTTAAGTATCTTCTTGATTTTGGTAAA AGAAGATTCTTGCCGGACATTGTTGTTCGATGTGGAACAGTACCAGAAGAGGCGTCAACT GAAAGAAAGAGATATTGGTTAGAAGAAGCTCACATGCCCTTGCATCTTGTGAAAGGGTTT GAGGAGAAAAGAATTGCTCGCAAATCTAGCAAGATAACTGTCGGGAAACATCGTGAAACG AAGAGAATAATGAAAAAGCCTCTTAAGGAAAAGGGATTTGCATACCTTTTCCTTAAAGCA GAGAGATCAGAGTATTATCAGTGTGGGCATTGTAACAAAGATGTCCTAATTAGGGAAGCT GTTAGCTGTCAGTACTGCAAAGGTTTTTTCCATAAACGACATGTTAGAAAGTCCACTGGA GTCGTTGCTGCTGAGTTTAAGCATACATGTCACAAGTGTATGGATGTGAATAATGTGAGG AAGAATGTGAAGAGGGGGAGGATAGAGATGCAGAAGAGTGAGGAAGCATCAAAAGCCTTG AGGCCGCTGCGCTTAAAGGTTATATCTGGAGGCACCAAAAATAAACAGCCAGCACAGTCG CCAAGTAGCAAAAAGAAGCCTGTGGTTATGCCCCTCAGACGTTCTGCAAGGAGGGCTAAA TTTGTAGTTGTGCAAAACAAAAAAATAGGACGCAAGAAAGGTAAACAAACAAAATCTGGA AGGGGGAGGGGTAGGCCTAGGAAACATGCAAAAGTTGACATATCAGAGAAAAAGAAACCA GCAGAAGTCGCTTGGCGGAGGAAGAGAATGCAGTTATGTCGGATTTACTGGCTGAATGGT CTATTGCTCTCACAAAAGCCAAAAGATGAAAGAGTGACACTCTTCAGGAGTAAAAAGCTT CTTGTTCTTTCTGGAGAATTGGGCGGCGCAGCTGATCAGCCAAAGTGCAGTCTTTGTGGT GAACTAGAATATACACCTACTTCAAATTACATTGCATGTGAAGTTTGTGGAGACTGGTTC CATGGAGATGCTTTCGGTCTTACAGCCGAAAGAATTACTAAGCTAATTGGATTCAAGTGT CACGAATGTCGGCAAAGGAACCCTCCTTTTTGTGCTCATTTGCATGCGACCAATAGCAAG GGTAAGCAGGTTATGTGGGAGAGTACAGAGTGTAAATCTGCAGATGAAACATTTGACATT GAATCTCTCTCAAGTAAGGGACCACTAGAACAGAAATCTCATTTGAATGATGAATCAGGA TCTTGTTTTACTGGTGATAATGGTGAAAAGTGCCCGCAAGGGACTCCTCTTGACTCATGC CATGCAGAGAATGGAAGTTTGCCTATTATTAGTTCAGAGCAGAGAAAAACTACTGATAGC TGTAGCGAGATGGACATTGTACTTCCAGAGGAACCGGGCTTATTGAATGACAATGTCAAT GCTATCAAAGAGGATCAGACATCTAATGACAGCTCCTTGCTGAATGATGACGCTATAGAG TTGAATCCGAGGGAAGACATGGAGTAA
Advanced options
Filter low complexity
Expect
1e-10
1e-5
0.001
0.1
1
10
Matrix
PAM30
PAM70
BLOSUM45
BLOSUM62
BLOSUM80
Perform gapped alignment
Query Genetic codes - (T)Blastx only
Standard (1)
Vertebrate Mitochondrial (2)
Yeast Mitochondrial (3)
Mold Mitochondrial; ... (4)
Invertebrate Mitochondrial (5)
Ciliate Nuclear; ... (6)
Echinoderm Mitochondrial (9)
Euplotid Nuclear (10)
Bacterial (11)
Alternative Yeast Nuclear (12)
Ascidian Mitochondrial (13)
Flatworm Mitochondrial (14)
Blepharisma Macronuclear (15)
Output format
Pairwise
query-anchored showing identities
query-anchored no identities
flat query-anchored, show identities
flat query-anchored, no identities
XML BLAST output
tabular
tabular with comment lines
Text ASN.1
Binary ASN.1
Comma-seperated values
BLAST archive format (ASN.1)
Descriptions
0
1
10
50
100
250
500
Alignments
0
1
10
50
100
250
500