Gene: vmacro23501
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro23501
- Transcript Identifier vmacro23501-RA
- Gene Type Coding gene
- Location scaffold00726_Vaccinium_macrocarpon_Stevens_v1 : 1815-9149 : negative
Gene Family Information
- ID HOM05D000727
- #Genes/#Species 800/97
- Phylogenetic origin
- ID ORTHO05D000541
- #Genes/#Species 799/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro23501_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to HMGB3: High mobility group B protein 3 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | Zm00001eb271910 |
GO:0006333 | ISO | PLAZA Integrative Orthology | chromatin assembly or disassembly | AT3G51880 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT3G51880 |
GO:0030527 | ISO | PLAZA Integrative Orthology | structural constituent of chromatin | AT3G51880 |
GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | Zm00001eb271910 |
GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT3G51880 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | Zm00001eb271910 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G17560 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G51880 |
GO:0000785 | ISO | PLAZA Integrative Orthology | chromatin | AT3G51880 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
12.1.3.1 | Chromatin organisation.chromatin structure.DNA bending.architectural protein (HMG-B) |