Gene: vmacro17211

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro17211
  • Transcript Identifier vmacro17211-RA
  • Gene Type Coding gene
  • Location chr3_Vaccinium_macrocarpon_Stevens_v1 : 35352680-35354152 : negative

Gene Family Information

  • ID HOM05D000824
  • #Genes/#Species 721/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro17211_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to RPA1A: Replication protein A 70 kDa DNA-binding subunit A (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication
GO:0006281
IEA
InterProDNA repair
GO:0006310
IEA
InterProDNA recombination
GO:0048232
ISO
PLAZA Integrative Orthologymale gamete generation AT2G06510
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT2G06510
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT2G06510
GO:0007140
ISO
PLAZA Integrative Orthologymale meiotic nuclear division Os02g0776800
GO:0007141
ISO
PLAZA Integrative Orthologymale meiosis I AT2G06510
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT2G06510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os02g0776800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT2G06510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004591 Replication factor A protein 1
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 Nucleic acid-binding, OB-fold
IPR013955 Replication factor A, C-terminal
IPR031657 Replication protein A, OB domain
Mapman id Description
13.2.3.5.1 Cell cycle organisation.DNA replication.elongation.single-stranded-DNA binding RPA complex.component RPA1
13.3.5.4.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.component RPA1