Gene: vmacro17070
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro17070
- Transcript Identifier vmacro17070-RA
- Gene Type Coding gene
- Location chr3_Vaccinium_macrocarpon_Stevens_v1 : 37642269-37660480 : negative
Gene Family Information
- ID HOM05D004198
- #Genes/#Species 169/94
- Phylogenetic origin
- ID ORTHO05D006470
- #Genes/#Species 142/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro17070_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to LKR/SDH: Alpha-aminoadipic semialdehyde synthase (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019477 | ISO | PLAZA Integrative Orthology | L-lysine catabolic process | AT4G33150 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0047130 | ISO | PLAZA Integrative Orthology | saccharopine dehydrogenase (NADP+, L-lysine-forming) activity | AT4G33150 |
| GO:0004753 | ISO | PLAZA Integrative Orthology | saccharopine dehydrogenase activity | AT4G33150 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G33150 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G33150 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032095 | Saccharopine dehydrogenase-like, C-terminal |
| IPR043009 | LOR/SDH bifunctional enzyme, conserved domain superfamily |
| IPR007545 | LOR/SDH bifunctional enzyme, conserved domain |
| IPR007698 | Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain |
| IPR007886 | Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal |
| IPR005097 | Saccharopine dehydrogenase, NADP binding domain |
| Mapman id | Description |
|---|---|
| 4.2.4.1 | Amino acid metabolism.degradation.lysine.bifunctional lysine ketoglutarate reductase and saccharopine dehydrogenase |