Gene: vmacro13390

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro13390
  • Transcript Identifier vmacro13390-RA
  • Gene Type Coding gene
  • Location chr7_Vaccinium_macrocarpon_Stevens_v1 : 3004428-3005540 : negative

Gene Family Information

  • ID HOM05D000244
  • #Genes/#Species 1727/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro13390_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to AHL22: AT-hook motif nuclear-localized protein 22 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009938
ISO
PLAZA Integrative Orthologynegative regulation of gibberellic acid mediated signaling pathway AT4G35390
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT3G60870
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT2G45430
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G60870
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G04570
GO:0045824
ISO
PLAZA Integrative Orthologynegative regulation of innate immune response AT3G04570
GO:0009647
ISO
PLAZA Integrative Orthologyskotomorphogenesis AT2G45430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT4G35390
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G04570
GO:0042826
ISO
PLAZA Integrative Orthologyhistone deacetylase binding AT2G45430
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT4G35390

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G35390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005175 PPC domain
IPR014476 AT-hook motif nuclear-localized protein 15-29
Mapman id Description
15.5.8.1 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-A transcription factor (AHL)