Gene: AT3G60870
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G60870
- Transcript Identifier AT3G60870.1
- Gene Type Coding gene
- Location Chr3 : 22493204-22494001 : positive
Gene Family Information
- ID HOM05D000244
- #Genes/#Species 1727/95
- Phylogenetic origin
- ID ORTHO05D000179
- #Genes/#Species 1482/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G60870.1
- symbol AHL18
- uniprot Q9LZX7
Descriptions
- Description AT-hook motif nuclear-localized protein 18
- Computational description AT-hook motif nuclear-localized protein 18 (AHL18); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 22 (TAIR:AT2G45430.1); Has 760 Blast hits to 756 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 758; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010228 | IMP IBA | Gene Ontology | vegetative to reproductive phase transition of meristem | 1 2 |
GO:0048364 | IMP | Gene Ontology | root development | 3 |
GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
GO:0009908 | IEA | GOA Database | flower development |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003680 | IEA | GOA Database | minor groove of adenine-thymine-rich DNA binding | |
GO:0003680 | IBA | Gene Ontology | minor groove of adenine-thymine-rich DNA binding | 2 |
GO:0003680 | IEA | InterPro | minor groove of adenine-thymine-rich DNA binding | |
GO:0003700 | IBA | Gene Ontology | DNA-binding transcription factor activity | 2 |
GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IDA IBA | Gene Ontology | nucleus | 2 3 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.8.1 | RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-A transcription factor (AHL) |