Gene: vmacro12988

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro12988
  • Transcript Identifier vmacro12988-RA
  • Gene Type Coding gene
  • Location chr11_Vaccinium_macrocarpon_Stevens_v1 : 34679503-34684713 : positive

Gene Family Information

  • ID HOM05D000723
  • #Genes/#Species 800/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro12988_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to RIBA1: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009231
IEA
InterProriboflavin biosynthetic process
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D000723

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008686
IEA
InterPro3,4-dihydroxy-2-butanone-4-phosphate synthase activity
GO:0003935
IEA
InterProGTP cyclohydrolase II activity
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D000723

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G64300
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G22450
GO:0005840
ISO
PLAZA Homology (enrichment)ribosome HOM05D000723

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB
IPR036144 GTP cyclohydrolase II superfamily
IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily
IPR032677 GTP cyclohydrolase II
IPR000926 GTP cyclohydrolase II, RibA
Mapman id Description
50.3.5 Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond