Gene: vmacro10246

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro10246
  • Transcript Identifier vmacro10246-RA
  • Gene Type Coding gene
  • Location chr8_Vaccinium_macrocarpon_Stevens_v1 : 6058749-6081668 : negative

Gene Family Information

  • ID HOM05D001807
  • #Genes/#Species 363/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro10246_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to ycf45: Uncharacterized protein ycf45 (Porphyra purpurea OX=2787)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0032784
IEA
InterProregulation of DNA-templated transcription, elongation
GO:0090677
ISO
PLAZA Integrative Orthologyreversible differentiation AT3G10420
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT3G10420
GO:0009657
ISO
PLAZA Integrative Orthologyplastid organization AT3G10420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G10420
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G10420
GO:0031972
ISO
PLAZA Integrative Orthologychloroplast intermembrane space AT3G10420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005824 KOW
IPR041977 Spt5, KOW domain repeat 4
IPR003959 ATPase, AAA-type, core
IPR036735 NusG, N-terminal domain superfamily
IPR014722 Ribosomal protein L2, domain 2
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR034081 AAA domain-containing protein, R3H domain
IPR039659 Transcription elongation factor SPT5
IPR041973 Spt5, KOW domain repeat 1
Mapman id Description
12.5.1.5 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RNA polymerase-V auxiliary factor (KTF1/SPT5L)