Gene: AT3G10420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G10420
  • Transcript Identifier AT3G10420.2
  • Gene Type Coding gene
  • Location Chr3 : 3239307-3242274 : positive

Gene Family Information

  • ID HOM05D001807
  • #Genes/#Species 363/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G10420.2
  • symbol SPD1
  • full_name SEEDLING PLASTID DEVELOPMENT 1
  • uniprot F4J3R7

Descriptions

  • Description P-loop containing nucleoside triphosphate hydrolases superfamily protein
  • Computational description P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1); Has 1488 Blast hits to 1479 proteins in 630 species: Archae - 20; Bacteria - 1182; Metazoa - 12; Fungi - 5; Plants - 115; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).
  • Computational description P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1); Has 1500 Blast hits to 1489 proteins in 625 species: Archae - 20; Bacteria - 1170; Metazoa - 12; Fungi - 5; Plants - 122; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090677
IMP
Gene Ontologyreversible differentiation1
GO:0010431
IMP
Gene Ontologyseed maturation1
GO:0009657
IMP
Gene Ontologyplastid organization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009941
IEA
GOA Databasechloroplast envelope
GO:0009941
IDA
Gene Ontologychloroplast envelope1
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM
Gene Ontologychloroplast1 2
GO:0009536
IEA
GOA Databaseplastid
GO:0031969
IEA
GOA Databasechloroplast membrane
GO:0031972
IDA
Gene Ontologychloroplast intermembrane space1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR034081 AAA domain-containing protein, R3H domain
IPR003593 AAA+ ATPase domain
IPR003959 ATPase, AAA-type, core
Mapman id Description
35.1 not assigned.annotated