Gene: vmacro09982

General Information

Structural Information

Species Vaccinium macrocarpon
Gene Identifier vmacro09982
Transcript Identifier vmacro09982-RA
Gene Type Coding gene
Location chr8_Vaccinium_macrocarpon_Stevens_v1 : 3459247-3464611 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002744
#Genes/#Species 252/100
Phylogenetic origin

ID ORTHO05D006546
#Genes/#Species 141/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id vmacro09982_Vaccinium_macrocarpon_Stevens_v1

Descriptions

Short descriptions
Ortholog descriptions

Description Similar to At2g40430: Ribosome biogenesis protein NOP53 (Arabidopsis thaliana OX=3702)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000460	ISO	PLAZA Integrative Orthology	maturation of 5.8S rRNA	AT2G40430
GO:0051781	ISO	PLAZA Integrative Orthology	positive regulation of cell division	AT2G40430
GO:0042254	ISO	PLAZA Integrative Orthology	ribosome biogenesis	AT2G40430
GO:0010971	ISO	PLAZA Integrative Orthology	positive regulation of G2/M transition of mitotic cell cycle	AT2G40430

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G40430
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT2G40430
GO:0005654	ISO	PLAZA Integrative Orthology	nucleoplasm	AT2G40430

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011687	Ribosome biogenesis protein Nop53/GLTSCR2

Mapman id	Description
17.1.2.2.1.8	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.assembly factor (SMO4)