Gene: AT5G04900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G04900
  • Transcript Identifier AT5G04900.1
  • Gene Type Coding gene
  • Location Chr5 : 1434826-1437194 : positive

Gene Family Information

  • ID HOM05D002784
  • #Genes/#Species 248/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G04900.1
  • symbol NOL
  • full_name NYC1-like
  • uniprot Q8LEU3

Descriptions

  • Description NYC1-like protein
  • Computational description NYC1-like (NOL); FUNCTIONS IN: oxidoreductase activity, chlorophyll(ide) b reductase activity; INVOLVED IN: chlorophyll catabolic process, PSII associated light-harvesting complex II catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G13250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015996
IEA
GOA Databasechlorophyll catabolic process
GO:0015996
IDA
Gene Ontologychlorophyll catabolic process1
GO:0010304
TAS
Gene OntologyPSII associated light-harvesting complex II catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0034256
IEA
GOA Databasechlorophyll(ide) b reductase activity
GO:0034256
IDA
Gene Ontologychlorophyll(ide) b reductase activity1
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast3
GO:0009579
IEA
GOA Databasethylakoid
GO:0016020
IEA
GOA Databasemembrane
GO:0009536
IEA
GOA Databaseplastid
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0005886
HDA
Gene Ontologyplasma membrane4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002347 Short-chain dehydrogenase/reductase SDR
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
7.13.2.4.2 Coenzyme metabolism.chlorophyll metabolism.chlorophyll catabolism.chlorophyll b reductase complex.component NOL