Gene: vmacro06185

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro06185
  • Transcript Identifier vmacro06185-RA
  • Gene Type Coding gene
  • Location chr2_Vaccinium_macrocarpon_Stevens_v1 : 2936035-2944889 : negative

Gene Family Information

  • ID HOM05D001408
  • #Genes/#Species 446/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro06185_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to RAN3: GTP-binding nuclear protein Ran-3 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G20010
GO:0006606
ISO
PLAZA Integrative Orthologyprotein import into nucleus AT5G20020
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G20010
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G20020
GO:0006913
IEA
InterPronucleocytoplasmic transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G20020
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G20020
GO:0003924
IEA
InterProGTPase activity
GO:0008270
IEA
InterProzinc ion binding
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G20020
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G20010
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G20010
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G20010
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G20020
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G55190
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G20010
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT5G20020
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G20020
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G20020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002041 Ran GTPase
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011016 Zinc finger, RING-CH-type
IPR001806 Small GTPase
IPR005225 Small GTP-binding protein domain
Mapman id Description
23.5.1.3 Protein translocation.nucleus.nucleocytoplasmic transport.GTPase (Ran)