Gene: AT5G20010

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G20010
  • Transcript Identifier AT5G20010.1
  • Gene Type Coding gene
  • Location Chr5 : 6760364-6761747 : positive

Gene Family Information

  • ID HOM05D001746
  • #Genes/#Species 371/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G20010.1
  • symbol RAN-1
  • Alias ATRAN1,ARABIDOPSIS THALIANA RAS-RELATED NUCLEAR PROTEIN,RAN1,RAS-RELATED NUCLEAR PROTEIN
  • uniprot P41916

Descriptions

  • Description RAS-related nuclear protein-1
  • Computational description RAS-related nuclear protein-1 (RAN-1); FUNCTIONS IN: protein binding, GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, response to salt stress, protein import into nucleus; LOCATED IN: apoplast, cell wall, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAN GTPase 3 (TAIR:AT5G55190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006606
IBA
TAS
Gene Ontologyprotein import into nucleus1 2
GO:0000054
IBA
Gene Ontologyribosomal subunit export from nucleus2
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006913
IEA
GOA Databasenucleocytoplasmic transport
GO:0006913
IEA
InterPronucleocytoplasmic transport
GO:0042742
IMP
Gene Ontologydefense response to bacterium3
GO:0050832
IMP
Gene Ontologydefense response to fungus3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
ISS, IBA
Gene OntologyGTPase activity1 2
GO:0003924
IEA
InterProGTPase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
ISS
Gene OntologyGTP binding1
GO:0005525
IEA
InterProGTP binding
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0003729
IDA
Gene OntologymRNA binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast6
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2
GO:0005618
IDA
GOA Databasecell wall
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus7
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane8
GO:0005829
IDA, HDA
Gene Ontologycytosol3 9
GO:0009505
HDA
Gene Ontologyplant-type cell wall10
GO:0009536
HDA
Gene Ontologyplastid11
GO:0005622
TAS
Gene Ontologyintracellular anatomical structure1
GO:0005737
IBA
Gene Ontologycytoplasm2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005225 Small GTP-binding protein domain
IPR002041 Ran GTPase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001806 Small GTPase
Mapman id Description
23.5.1.3 Protein translocation.nucleus.nucleocytoplasmic transport.GTPase (Ran)