Gene: vmacro01052

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro01052
  • Transcript Identifier vmacro01052-RA
  • Gene Type Coding gene
  • Location chr1_Vaccinium_macrocarpon_Stevens_v1 : 20372243-20377790 : negative

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro01052_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to MADS4: Agamous-like MADS-box protein MADS4 (Vitis vinifera OX=29760)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048833
ISO
PLAZA Integrative Orthologyspecification of floral organ number AT1G24260
GO:0010364
ISO
PLAZA Integrative Orthologyregulation of ethylene biosynthetic process Solyc05g012020.4
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT1G24260
GO:0001708
ISO
PLAZA Integrative Orthologycell fate specification AT1G24260
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT1G24260
GO:0048442
ISO
PLAZA Integrative Orthologysepal development AT2G03710
GO:0048443
ISO
PLAZA Integrative Orthologystamen development AT2G03710
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G24260
GO:0009836
ISO
PLAZA Integrative Orthologyfruit ripening, climacteric Solyc05g012020.4
GO:0048440
ISO
PLAZA Integrative Orthologycarpel development AT2G03710
GO:0048441
ISO
PLAZA Integrative Orthologypetal development AT2G03710
GO:0080001
ISO
PLAZA Integrative Orthologymucilage extrusion from seed coat AT1G24260
GO:0010093
ISO
PLAZA Integrative Orthologyspecification of floral organ identity AT1G24260
GO:0010076
ISO
PLAZA Integrative Orthologymaintenance of floral meristem identity AT2G03710
GO:0016117
ISO
PLAZA Integrative Orthologycarotenoid biosynthetic process Solyc05g012020.4
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G24260
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033896 MADS MEF2-like
IPR036879 Transcription factor, MADS-box superfamily
IPR002100 Transcription factor, MADS-box
IPR002487 Transcription factor, K-box
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)