Gene: arahy.Tifrunner.gnm1.ann1.UB40IU

General Information

Structural Information

Species Arachis hypogaea
Gene Identifier arahy.Tifrunner.gnm1.ann1.UB40IU
Transcript Identifier arahy.Tifrunner.gnm1.ann1.UB40IU.1
Gene Type Coding gene
Location arahy.Tifrunner.gnm1.Arahy.06 : 72648324-72649029 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003494
#Genes/#Species 195/95
Phylogenetic origin

ID ORTHO05D004033
#Genes/#Species 194/95
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id arahy.Tifrunner.gnm1.ann1.UB40IU.v1.0
pacid 42639376

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR10553//PTHR10553:SF9 - SMALL NUCLEAR RIBONUCLEOPROTEIN // SUBFAMILY NOT NAMED

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000387	ISO	PLAZA Homology (enrichment)	spliceosomal snRNP assembly	HOM05D003494

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G23930

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G23930
GO:0005681	ISO	PLAZA Homology (enrichment)	spliceosomal complex	HOM05D003494
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT3G11500

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001163	LSM domain, eukaryotic/archaea-type
IPR044641	Sm-like protein Lsm7/SmG
IPR010920	LSM domain superfamily

Mapman id	Description
16.2.2.7	RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-G