Gene: arahy.Tifrunner.gnm1.ann1.E98L7U

General Information

Structural Information

  • Species Arachis hypogaea
  • Gene Identifier arahy.Tifrunner.gnm1.ann1.E98L7U
  • Transcript Identifier arahy.Tifrunner.gnm1.ann1.E98L7U.1
  • Gene Type Coding gene
  • Location arahy.Tifrunner.gnm1.Arahy.11 : 146949403-146955504 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id arahy.Tifrunner.gnm1.ann1.E98L7U.v1.0
  • pacid 42640864

Descriptions

  • Description PF01535//PF04484//PF12854//PF13041//PF14432 - PPR repeat (PPR) // Family of unknown function (DUF566) (DUF566) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT4G30700
GO:0000963
ISO
PLAZA Integrative Orthologymitochondrial RNA processing AT4G30700
GO:0016554
ISO
PLAZA Integrative Orthologycytidine to uridine editing AT3G11460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G30700
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G11460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032867 DYW domain
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR007573 QWRF family
Mapman id Description
16.11.3.3.4.22 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF29)
20.1.2.2.8 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.Augmin gamma-Tubulin Ring Complex recruiting complex.component AUG8