Gene: Zm00001eb308540

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb308540
  • Transcript Identifier Zm00001eb308540_T001
  • Gene Type Coding gene
  • Location 7 : 77409320-77414746 : negative

Gene Family Information

  • ID HOM05D001843
  • #Genes/#Species 355/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb308540_T001
  • pid Zm00001eb308540_P001
  • uniprot A0A1D6I103
  • uniprot A0A3L6E0M5
  • uniprot A0A1D6I106
  • uniprot A0A1D6I110
  • uniprot A0A1D6I100
  • uniprot A0A1D6I102
  • uniprot A0A1D6I0Z9
  • uniprot A0A1D6I107
  • entrez 100384817
  • refseq XP_008651785.1
  • refseq XM_008653563.1
  • V4_identifier Zm00001d019920

Descriptions

  • Description Zm00001e033654
  • Description Protein SMG7
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000184
IBA
GOA Databasenuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT5G19400
GO:0060548
ISO
PLAZA Integrative Orthologynegative regulation of cell death AT5G19400
GO:0031347
ISO
PLAZA Integrative Orthologyregulation of defense response AT5G19400
GO:0090306
ISO
PLAZA Integrative Orthologymeiotic spindle assembly AT5G19400

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042162
IBA
GOA Databasetelomeric DNA binding
GO:0070034
IBA
GOA Databasetelomerase RNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005697
IBA
GOA Databasetelomerase holoenzyme complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G19400
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT5G19400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR019458 Telomerase activating protein Est1, N-terminal
IPR045153 Est1/Ebs1-like
IPR018834 DNA/RNA-binding domain, Est1-type
Mapman id Description
17.3.2.6 Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.effector protein (SMG7)