Gene: Zm00001eb282310
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb282310
- Transcript Identifier Zm00001eb282310_T001
- Gene Type Coding gene
- Location 6 : 135507320-135514559 : negative
Gene Family Information
- ID HOM05D002340
- #Genes/#Species 290/99
- Phylogenetic origin
- ID ORTHO05D003624
- #Genes/#Species 212/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb282310_T001
- pid Zm00001eb282310_P001
- uniprot A0A1D6LYR2
- uniprot A0A1D6LYR3
- uniprot A0A1D6LYR0
- uniprot A0A1D6LYR1
- uniprot B4FVK0
- uniprot C4J1R9
- uniprot A0A3L6E8Q6
- entrez 100273441
- refseq NP_001141350.1
- refseq XP_008647543.1
- refseq XM_008649323.1
- refseq NM_001147878.1
- refseq XM_008649322.1
- refseq XM_008649321.1
- refseq XP_008647544.1
- refseq XP_008647545.1
- V4_identifier Zm00001d037538
Descriptions
- Description Zm00001e031108
- Description Arginine--tRNA ligase chloroplastic/mitochondrial
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G26300 |
| GO:0006418 | IEA | GOA Database | tRNA aminoacylation for protein translation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0006420 | IBA IEA | GOA Database | arginyl-tRNA aminoacylation | |
| GO:0006420 | IEA | InterPro | arginyl-tRNA aminoacylation | |
| GO:0006412 | IEA | GOA Database | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004814 | IBA IEA | GOA Database | arginine-tRNA ligase activity | |
| GO:0004814 | IEA | InterPro | arginine-tRNA ligase activity | |
| GO:0004812 | IEA | GOA Database | aminoacyl-tRNA ligase activity | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016874 | IEA | GOA Database | ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G26300 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G26300 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G26300 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001278 | Arginine-tRNA ligase |
| IPR036695 | Arginyl tRNA synthetase N-terminal domain superfamily |
| IPR005148 | Arginyl tRNA synthetase N-terminal domain |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR035684 | Arginyl-tRNA synthetase, catalytic core domain |
| IPR008909 | DALR anticodon binding |
| IPR009080 | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding |
| Mapman id | Description |
|---|---|
| 17.2.2 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.arginine-tRNA ligase |