Gene: Zm00001eb190750

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb190750
  • Transcript Identifier Zm00001eb190750_T001
  • Gene Type Coding gene
  • Location 4 : 174316405-174335873 : negative

Gene Family Information

  • ID HOM05D000451
  • #Genes/#Species 1160/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb190750_T001
  • pid Zm00001eb190750_P001
  • uniprot A0A1D6QA77
  • uniprot A0A1D6QA99
  • uniprot A0A1D6QA67
  • uniprot A0A3L6EY18
  • uniprot A0A1D6QA80
  • uniprot A0A1D6QA71
  • uniprot A0A1D6QA82
  • uniprot A0A1D6QA93
  • uniprot A0A1D6QA61
  • uniprot A0A1D6QA84
  • uniprot A0A1D6QA74
  • uniprot A0A1D6QA85
  • uniprot A0A1D6QA96
  • entrez 100280238
  • refseq XM_008678924.1
  • refseq XP_008677146.1
  • V4_identifier Zm00001d051849

Descriptions

  • Description Zm00001e023535
  • Description Transcription factor jumonji (jmjC) domain-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032776
ISO
PLAZA Integrative OrthologyDNA methylation on cytosine AT3G07610
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT1G09060
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT3G07610
GO:2000616
ISO
PLAZA Integrative Orthologynegative regulation of histone H3-K9 acetylation AT1G09060
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT3G07610
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT1G09060
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G07610
GO:0051573
ISO
PLAZA Integrative Orthologynegative regulation of histone H3-K9 methylation AT1G09060
GO:0060969
ISO
PLAZA Integrative Orthologynegative regulation of gene silencing AT3G07610
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT3G07610
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT3G07610
GO:0070919
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in chromatin silencing by small RNA AT3G07610
GO:0033169
IBA
IEA
GOA Databasehistone H3-K9 demethylation
GO:0033169
IEA
InterProhistone H3-K9 demethylation
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0032259
IEA
GOA Databasemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT1G09060
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G09060
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G09060
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G09060
GO:0032454
IBA
IEA
GOA Databasehistone demethylase activity (H3-K9 specific)
GO:0032454
IEA
InterProhistone demethylase activity (H3-K9 specific)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0031490
IBA
GOA Databasechromatin DNA binding
GO:0003712
IBA
GOA Databasetranscription coregulator activity
GO:0008168
IEA
GOA Databasemethyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0000785
IBA
GOA Databasechromatin
GO:0000118
IBA
GOA Databasehistone deacetylase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018866 Zinc-finger domain of monoamine-oxidase A repressor R1
IPR017956 AT hook, DNA-binding motif
IPR045109 Histone demethylase JHDM2-like
IPR003347 JmjC domain
Mapman id Description
12.3.3.8.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM3)