Gene: Zm00001eb072270

General Information

Structural Information

Species Zea mays
Gene Identifier Zm00001eb072270
Transcript Identifier Zm00001eb072270_T001
Gene Type Coding gene
Location 2 : 13887583-13893274 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D004758
#Genes/#Species 154/96
Phylogenetic origin

ID ORTHO05D006063
#Genes/#Species 148/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Zm00001eb072270_T001
pid Zm00001eb072270_P001
uniprot A0A1D6E1H5
uniprot A0A1D6E1H4
uniprot A0A3L6FWT3
uniprot B4FFG0
uniprot A0A1D6E1H8
uniprot A0A1D6E1H2
uniprot A0A1D6E1I0
entrez 100193557
refseq XP_008667189.1
refseq XM_008668967.1
V4_identifier Zm00001d002483

Descriptions

Short descriptions
Ortholog descriptions

Description Zm00001e007090
Description Transducin family protein / WD-40 repeat family protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006364	IEA	GOA Database	rRNA processing
GO:0006364	IEA	InterPro	rRNA processing
GO:0000472	IBA	GOA Database	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480	IBA	GOA Database	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0051301	ISO	PLAZA Integrative Orthology	cell division	AT5G16750
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT5G16750
GO:0009880	ISO	PLAZA Integrative Orthology	embryonic pattern specification	AT5G16750

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0034511	IBA	GOA Database	U3 snoRNA binding
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005730	IBA IEA	GOA Database	nucleolus
GO:0032040	IEA	GOA Database	small-subunit processome
GO:0032040	IEA	InterPro	small-subunit processome
GO:0030686	IBA	GOA Database	90S preribosome

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily
IPR013934	Small-subunit processome, Utp13
IPR001680	WD40 repeat
IPR020472	G-protein beta WD-40 repeat
IPR036322	WD40-repeat-containing domain superfamily

Mapman id	Description
17.1.3.2.1.3.4	Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (TOZ)