Gene: Zm00001eb061780

General Information

Structural Information

Species Zea mays
Gene Identifier Zm00001eb061780
Transcript Identifier Zm00001eb061780_T001
Gene Type Coding gene
Location 1 : 297606441-297607976 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000037
#Genes/#Species 5045/97
Phylogenetic origin

ID ORTHO05D000648
#Genes/#Species 711/94
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid Zm00001eb061780_T001
pid Zm00001eb061780_P001
uniprot A0A317YH27
uniprot A0A1D6L8J2
entrez 103644218
refseq XP_008665637.1
refseq XM_008667415.1
V4_identifier Zm00001d034552

Descriptions

Short descriptions
Ortholog descriptions

Description Zm00001e006092
Description Polygalacturonase QRT2

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008152	IEA	GOA Database	metabolic process
GO:0005975	IEA	GOA Database	carbohydrate metabolic process
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0045490	IBA	GOA Database	pectin catabolic process
GO:0009901	IBA	GOA Database	anther dehiscence
GO:0010047	IBA	GOA Database	fruit dehiscence
GO:0048235	ISO	PLAZA Integrative Orthology	pollen sperm cell differentiation	AT3G07970
GO:0009830	ISO	PLAZA Integrative Orthology	cell wall modification involved in abscission	AT3G57510
GO:0010227	ISO	PLAZA Integrative Orthology	floral organ abscission	AT2G41850

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016798	IEA	GOA Database	hydrolase activity, acting on glycosyl bonds
GO:0016787	IEA	GOA Database	hydrolase activity
GO:0004650	IEA	GOA Database	polygalacturonase activity
GO:0004650	IEA	InterPro	polygalacturonase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005618	IEA	GOA Database	cell wall

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000743	Glycoside hydrolase, family 28
IPR006626	Parallel beta-helix repeat
IPR012334	Pectin lyase fold
IPR011050	Pectin lyase fold/virulence factor

Mapman id	Description
21.3.5.1.1	Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT2)