Gene: Zm00001eb052870

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb052870
  • Transcript Identifier Zm00001eb052870_T001
  • Gene Type Coding gene
  • Location 1 : 266244425-266266946 : positive

Gene Family Information

  • ID HOM05D003172
  • #Genes/#Species 215/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb052870_T001
  • pid Zm00001eb052870_P001
  • uniprot A0A1D6KZB0
  • uniprot A0A317Y5C6
  • uniprot A0A1D6KZA9
  • uniprot A0A1D6KZA7
  • uniprot A0A1D6KZA8
  • uniprot A0A1D6KZA5
  • uniprot A0A1D6KZB5
  • uniprot A0A1D6KZB2
  • uniprot A0A1D6KZB3
  • V4_identifier Zm00001d033494

Descriptions

  • Description Zm00001e005243
  • Description transcription regulator NOT2/NOT3/NOT5 family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0000289
IBA
GOA Databasenuclear-transcribed mRNA poly(A) tail shortening

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G18230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0030015
IBA
IEA
GOA DatabaseCCR4-NOT core complex
GO:0030015
IEA
InterProCCR4-NOT core complex
GO:0000932
IBA
GOA DatabaseP-body

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007282 NOT2/NOT3/NOT5, C-terminal
IPR012270 CCR4-NOT complex, subunit 3/ 5
IPR007207 CCR4-Not complex component, Not N-terminal domain
IPR038635 CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamily
IPR040168 Not2/Not3/Not5
Mapman id Description
16.4.2.1.2.5 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.component NOT3/5