Gene: Zm00001eb023940

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb023940
  • Transcript Identifier Zm00001eb023940_T001
  • Gene Type Coding gene
  • Location 1 : 96461858-96462991 : negative

Gene Family Information

  • ID HOM05D000479
  • #Genes/#Species 1104/98
  • Phylogenetic origin
  • ID ORTHO05D444724
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb023940_T001
  • pid Zm00001eb023940_P001
  • uniprot A0A1D6K8T2
  • uniprot A0A317Y8Q4
  • V4_identifier Zm00001d029981

Descriptions

  • Description Zm00001e102555
  • Description Putative CCR4-associated factor 1 homolog 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090503
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, exonucleolytic
GO:0043928
IBA
GOA Databaseexonucleolytic catabolism of deadenylated mRNA

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004535
IBA
IEA
GOA Databasepoly(A)-specific ribonuclease activity
GO:0004535
IEA
InterPropoly(A)-specific ribonuclease activity
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0030014
IEA
GOA DatabaseCCR4-NOT complex
GO:0030014
IEA
InterProCCR4-NOT complex
GO:0030015
IBA
GOA DatabaseCCR4-NOT core complex
GO:0000932
IBA
GOA DatabaseP-body

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006941 Ribonuclease CAF1
IPR036397 Ribonuclease H superfamily
IPR039637 CCR4-NOT transcription complex subunit 7/8/Pop2
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
35.1 not assigned.annotated