Gene: Thhalv10007093m.g
General Information
Structural Information
- Species Eutrema salsugineum
- Gene Identifier Thhalv10007093m.g
- Transcript Identifier Thhalv10007093m
- Gene Type Coding gene
- Location scaffold_5 : 12371649-12375321 : positive
Gene Family Information
- ID HOM05D000583
- #Genes/#Species 954/96
- Phylogenetic origin
- ID ORTHO05D000442
- #Genes/#Species 922/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Thhalv10007093m.g.v1.0
- pacid 20188347
Descriptions
- Description 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0030246 | IEA | InterPro | carbohydrate binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR010325 | Rhamnogalacturonate lyase |
| IPR011013 | Galactose mutarotase-like domain superfamily |
| IPR029413 | Rhamnogalacturonan lyase, domain II |
| IPR013784 | Carbohydrate-binding-like fold |
| IPR029411 | Rhamnogalacturonan lyase, domain III |
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR014718 | Glycoside hydrolase-type carbohydrate-binding |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |