Gene: Thecc.09G203900
General Information
Structural Information
- Species Theobroma cacao
- Gene Identifier Thecc.09G203900
- Transcript Identifier Thecc.09G203900.1
- Gene Type Coding gene
- Location Chromosome_9 : 24399389-24402814 : positive
Gene Family Information
- ID HOM05D000412
- #Genes/#Species 1233/100
- Phylogenetic origin
- ID ORTHO05D000429
- #Genes/#Species 945/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Thecc.09G203900.v2.1
- pacid 42008989
- ancestorIdentifier Thecc1EG039865.CGDv1.1
- ancestorIdentifier Thecc1EG039865t2.CGDv1.1
Descriptions
- Description Evolutionarily conserved C-terminal region 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G13460 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G55500 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G13460 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G13460 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G55500 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007275 | YTH domain |
| Mapman id | Description |
|---|---|
| 16.5.8.2.1 | RNA processing.RNA modification.mRNA methylation.N6-methyladenosine methylation reading.methylation reader (ECT) |