Gene: Thecc.02G173500

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.02G173500
  • Transcript Identifier Thecc.02G173500.1
  • Gene Type Coding gene
  • Location Chromosome_2 : 10414021-10417106 : negative

Gene Family Information

  • ID HOM05D004586
  • #Genes/#Species 158/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.02G173500.v2.1
  • pacid 42035569
  • ancestorIdentifier Thecc1EG007972.CGDv1.1
  • ancestorIdentifier Thecc1EG007972t2.CGDv1.1

Descriptions

  • Description Nuclear assembly factor 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0000493
IEA
InterProbox H/ACA snoRNP assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005732
IEA
InterProsno(s)RNA-containing ribonucleoprotein complex
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G03530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007504 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1
IPR009000 Translation protein, beta-barrel domain superfamily
IPR038664 H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain
IPR040309 H/ACA ribonucleoprotein complex non-core subunit Naf1
Mapman id Description
17.1.1.2.2.1.4 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.non-core component Nhp2/Naf1