Gene: TWI60G1516
General Information
Structural Information
- Species Tripterygium wilfordii
- Gene Identifier TWI60G1516
- Transcript Identifier TWI60G1516.02
- Gene Type Coding gene
- Location NC_052246.1 : 1924797-1926861 : negative
Gene Family Information
- ID HOM05D001458
- #Genes/#Species 433/99
- Phylogenetic origin
- ID ORTHO05D008462
- #Genes/#Species 119/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna-XM_038869388.1
- id gene-LOC120016556
- Dbxref GeneID:120016556
- Dbxref GeneID:120016556,Genbank:XM_038869388.1
- pid XP_038725316.1
Descriptions
- product meiotic recombination protein SPO11-2, transcript variant X2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042138 | IEA | InterPro | meiotic DNA double-strand break formation | |
| GO:0006259 | IEA | InterPro | DNA metabolic process | |
| GO:0051026 | ISO | PLAZA Integrative Orthology | chiasma assembly | AT1G63990 |
| GO:0051321 | ISO | PLAZA Integrative Orthology | meiotic cell cycle | AT1G63990 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT1G63990 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT1G63990 |
| GO:0048437 | ISO | PLAZA Integrative Orthology | floral organ development | AT1G63990 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT1G63990 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003918 | IEA | InterPro | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G63990 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | InterPro | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002815 | Spo11/DNA topoisomerase VI subunit A |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR036078 | Spo11/DNA topoisomerase VI subunit A superfamily |
| IPR034136 | Topoisomerase 6 subunit A/Spo11, TOPRIM domain |
| IPR013049 | Spo11/DNA topoisomerase VI, subunit A, N-terminal |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |