Gene: TPR.G7788

General Information

Structural Information

Species Trifolium pratense
Gene Identifier TPR.G7788
Transcript Identifier TPR.T8055
Gene Type Coding gene
Location Tp57577_TGAC_v2_scaf_291 : 82846-86029 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002459
#Genes/#Species 276/95
Phylogenetic origin

ID ORTHO05D003006
#Genes/#Species 249/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Tp57577_TGAC_v2_mRNA8055.v2
id Tp57577_TGAC_v2_gene7788.v2
pacid 35959240
uniprot A0A2K3NSP7

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0031047	IEA	GOA Database	gene silencing by RNA
GO:0031047	IEA	InterPro	gene silencing by RNA
GO:0051607	IEA	GOA Database	defense response to virus
GO:0051607	IEA	InterPro	defense response to virus
GO:0009616	ISO	PLAZA Integrative Orthology	RNAi-mediated antiviral immune response	AT5G23570
GO:0010050	ISO	PLAZA Integrative Orthology	vegetative phase change	AT5G23570
GO:0010267	ISO	PLAZA Integrative Orthology	production of ta-siRNAs involved in RNA interference	AT5G23570
GO:0010025	ISO	PLAZA Integrative Orthology	wax biosynthetic process	AT5G23570

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT5G23570
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT5G23570
GO:0005783	ISO	PLAZA Integrative Orthology	endoplasmic reticulum	AT5G23570

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR044287	Protein SUPPRESSOR OF GENE SILENCING 3
IPR005381	Zinc finger-XS domain
IPR005380	XS domain
IPR038588	XS domain superfamily

Mapman id	Description
12.5.1.3	Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.stabilization factor (SGS3)