Gene: TPR.G4478

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G4478
  • Transcript Identifier TPR.T4625
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG7 : 3973058-3975796 : negative

Gene Family Information

  • ID HOM05D002797
  • #Genes/#Species 247/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA4625.v2
  • id Tp57577_TGAC_v2_gene4478.v2
  • pacid 35956908
  • uniprot A0A2K3LFE3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070536
IEA
GOA Databaseprotein K63-linked deubiquitination
GO:0006508
IEA
GOA Databaseproteolysis
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT5G23540
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G23540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008237
IEA
GOA Databasemetallopeptidase activity
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0070122
IEA
InterProisopeptidase activity
GO:0061578
IEA
GOA DatabaseLys63-specific deubiquitinase activity
GO:0061578
IEA
InterProLys63-specific deubiquitinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000502
IEA
GOA Databaseproteasome complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G23540
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G23540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
IPR035299 26S Proteasome non-ATPase regulatory subunit 14
IPR024969 Rpn11/EIF3F, C-terminal
Mapman id Description
19.2.5.2.2.10 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN11