Gene: AT5G23540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G23540
  • Transcript Identifier AT5G23540.1
  • Gene Type Coding gene
  • Location Chr5 : 7937772-7939339 : positive

Gene Family Information

  • ID HOM05D002797
  • #Genes/#Species 247/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G23540.1
  • uniprot Q9LT08

Descriptions

  • Description Mov34/MPN/PAD-1 family protein
  • Computational description Mov34/MPN/PAD-1 family protein; INVOLVED IN: response to salt stress, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0070536
IEA
GOA Databaseprotein K63-linked deubiquitination
GO:0016579
IBA
Gene Ontologyprotein deubiquitination1
GO:0043161
IBA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0030163
TAS
Gene Ontologyprotein catabolic process2
GO:0006511
TAS
Gene Ontologyubiquitin-dependent protein catabolic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008237
IBA
IEA
Gene Ontologymetallopeptidase activity1
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0061578
IEA
Gene OntologyLys63-specific deubiquitinase activity
GO:0061578
IEA
InterProLys63-specific deubiquitinase activity
GO:0070122
IEA
Gene Ontologyisopeptidase activity
GO:0070122
IEA
InterProisopeptidase activity
GO:0005515
IEA
InterProprotein binding
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0070628
IBA
Gene Ontologyproteasome binding1
GO:0004843
IBA
Gene Ontologythiol-dependent deubiquitinase1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000502
IEA
GOA Databaseproteasome complex
GO:0000502
IDA
Gene Ontologyproteasome complex4
GO:0005829
IDA
GOA Databasecytosol
GO:0008541
IBA
Gene Ontologyproteasome regulatory particle, lid subcomplex1
GO:0005634
TAS
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024969 Rpn11/EIF3F, C-terminal
IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
IPR035299 26S Proteasome non-ATPase regulatory subunit 14
Mapman id Description
19.2.5.2.2.10 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN11