Gene: TPR.G34354

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G34354
  • Transcript Identifier TPR.T35523
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG1 : 26002108-26008698 : negative

Gene Family Information

  • ID HOM05D000460
  • #Genes/#Species 1145/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA35523.v2
  • id Tp57577_TGAC_v2_gene34354.v2
  • pacid 35978762

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0080001
ISO
PLAZA Integrative Orthologymucilage extrusion from seed coat AT1G19900
GO:0098609
ISO
PLAZA Integrative Orthologycell-cell adhesion AT1G19900
GO:0042545
ISO
PLAZA Integrative Orthologycell wall modification AT1G19900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0045480
ISO
PLAZA Integrative Orthologygalactose oxidase activity AT1G19900

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015934
IEA
InterProlarge ribosomal subunit
GO:0005840
IEA
InterProribosome
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G19900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037293 Galactose oxidase, central domain superfamily
IPR005755 Ribosomal protein L13, eukaryotic/archaeal
IPR005822 Ribosomal protein L13
IPR011043 Galactose oxidase/kelch, beta-propeller
IPR009880 Glyoxal oxidase, N-terminal
IPR013783 Immunoglobulin-like fold
IPR036899 Ribosomal protein L13 superfamily
IPR015202 Galactose oxidase-like, Early set domain
IPR014756 Immunoglobulin E-set
Mapman id Description
17.1.2.1.14 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL13a
21.3.2.2.1 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.rhamnogalacturonan-I galactose oxidase (RUBY)