Gene: TPR.G18132

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G18132
  • Transcript Identifier TPR.T18763
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG2 : 16871156-16883526 : positive

Gene Family Information

  • ID HOM05D004501
  • #Genes/#Species 160/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA18763.v2
  • id Tp57577_TGAC_v2_gene18132.v2
  • pacid 35969664

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT2G39810
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT2G39810
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT2G39810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G39810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G39810
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G39810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025151 ELYS-like domain
IPR044718 E3 ubiquitin-protein ligase HOS1
IPR028364 Ribosomal protein L1/ribosomal biogenesis protein
IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich
IPR023674 Ribosomal protein L1-like
Mapman id Description
17.1.2.1.10 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL10a
23.5.1.1.1.10 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (ELYS)