Gene: Sp5g15860

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp5g15860
  • Transcript Identifier Sp5g15860.1
  • Gene Type Coding gene
  • Location ch5-1 : 6229150-6233040 : positive

Gene Family Information

  • ID HOM05D001959
  • #Genes/#Species 338/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp5g15860.v2.2
  • pacid 45076826

Descriptions

  • Description K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032544
ISO
PLAZA Integrative Orthologyplastid translation AT5G60170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0004842
IEA
InterProubiquitin-protein transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030014
IEA
InterProCCR4-NOT complex
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G45630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003954 RNA recognition motif domain, eukaryote
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR039515 NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 CCR4-NOT transcription complex subunit 4
IPR000504 RNA recognition motif domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR034261 CNOT4, RNA recognition motif
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.4.2.1.2.6 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.component NOT4