Gene: Sp5g09110

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp5g09110
  • Transcript Identifier Sp5g09110.1
  • Gene Type Coding gene
  • Location ch5-1 : 3395242-3398748 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp5g09110.v2.2
  • pacid 45077382

Descriptions

  • Description K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045732
ISO
PLAZA Integrative Orthologypositive regulation of protein catabolic process AT3G53230
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G53230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0016787
IEA
InterProhydrolase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G53230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G53230
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G53230
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G53230
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G53230
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT3G53230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004201 CDC48, domain 2
IPR003338 CDC48, N-terminal subdomain
IPR009010 Aspartate decarboxylase-like domain superfamily
IPR041569 AAA ATPase, AAA+ lid domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR003959 ATPase, AAA-type, core
IPR029067 CDC48 domain 2-like superfamily
IPR005938 AAA ATPase, CDC48 family
Mapman id Description
19.2.4.1.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.platform ATPase component CDC48