Gene: Sp1g36650

General Information

Structural Information

Species Schrenkiella parvula
Gene Identifier Sp1g36650
Transcript Identifier Sp1g36650.1
Gene Type Coding gene
Location ch1-2 : 3062299-3065430 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000428
#Genes/#Species 1201/100
Phylogenetic origin

ID ORTHO05D000582
#Genes/#Species 762/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Sp1g36650.v2.2
pacid 45075511

Descriptions

Short descriptions
Ortholog descriptions

Description K13126 - polyadenylate-binding protein (PABPC)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT1G49760

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003723	IEA	InterPro	RNA binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G49760
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G49760

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G49760

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein
IPR003954	RNA recognition motif domain, eukaryote
IPR036053	PABC (PABP) domain
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR035979	RNA-binding domain superfamily
IPR006515	Polyadenylate binding protein, human types 1, 2, 3, 4

Mapman id	Description
17.4.2.5	Protein biosynthesis.translation initiation.mRNA loading.mRNA poly-A-tail binding factor (PABP)