Gene: Sopen12g024890

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g024890
  • Transcript Identifier Sopen12g024890.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 63128166-63135557 : negative

Gene Family Information

  • ID HOM05D000002
  • #Genes/#Species 26594/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g024890.1

Descriptions

  • Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042744
IEA
InterProhydrogen peroxide catabolic process
GO:0006979
IEA
InterProresponse to oxidative stress
GO:0015074
IEA
InterProDNA integration

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0004601
IEA
InterProperoxidase activity
GO:0020037
IEA
InterProheme binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
IPR033905 Secretory peroxidase
IPR025724 GAG-pre-integrase domain
IPR005162 Retrotransposon gag domain
IPR010255 Haem peroxidase superfamily
IPR000823 Plant peroxidase
IPR002016 Haem peroxidase
IPR043502 DNA/RNA polymerase superfamily
IPR001584 Integrase, catalytic core
IPR029472 Retrotransposon Copia-like, N-terminal
Mapman id Description
35.1 not assigned.annotated