Gene: Sopen12g023880
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen12g023880
- Transcript Identifier Sopen12g023880.1
- Gene Type Coding gene
- Location Spenn-ch12 : 60691944-60695807 : positive
Gene Family Information
- ID HOM05D001047
- #Genes/#Species 579/92
- Phylogenetic origin
- ID ORTHO05D000768
- #Genes/#Species 621/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen12g023880.1
Descriptions
- Description JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. | TIFY10A | CONTAINS InterPro DOMAIN/s: Tify , CCT domain-like | BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G72450 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT1G72450 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G72450 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G72450 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G72450 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 11.7.2.1.2 | Phytohormone action.jasmonic acid.perception and signal transduction.receptor complex.component JAZ |
| 15.5.43 | RNA biosynthesis.transcriptional regulation.transcription factor (TIFY) |