Gene: Sopen12g021160

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g021160
  • Transcript Identifier Sopen12g021160.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 56534820-56539508 : negative

Gene Family Information

  • ID HOM05D000112
  • #Genes/#Species 3032/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g021160.1

Descriptions

  • Description Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation. | auxin response factor 2 (ARF2) | FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 7 processes | LOCATED IN: nucleus, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation , Transcriptional factor B3 , AUX/IAA protein , Auxin response factor | BEST Arabidopsis thaliana protein match is: auxin response factor 1 ., Auxin response factor
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009725
IEA
InterProresponse to hormone
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G62000
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G62000
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G62000
GO:0008285
ISO
PLAZA Integrative Orthologynegative regulation of cell population proliferation AT5G62000
GO:1903288
ISO
PLAZA Integrative Orthologypositive regulation of potassium ion import across plasma membrane AT5G62000
GO:0010227
ISO
PLAZA Integrative Orthologyfloral organ abscission AT5G62000
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G62000
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT5G62000
GO:0010047
ISO
PLAZA Integrative Orthologyfruit dehiscence AT5G62000

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G62000
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G62000
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT5G62000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033389 AUX/IAA domain
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR044835 Auxin response factor
IPR010525 Auxin response factor domain
Mapman id Description
15.5.5.1 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)