Gene: Sopen12g003300

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g003300
  • Transcript Identifier Sopen12g003300.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 1938462-1957074 : positive

Gene Family Information

  • ID HOM05D000002
  • #Genes/#Species 26594/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g003300.1

Descriptions

  • Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Exostosin family protein | FUNCTIONS IN: catalytic activity | INVOLVED IN: biological_process unknown | LOCATED IN: membrane | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Exostosin-like | BEST Arabidopsis thaliana protein match is: Exostosin family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015074
IEA
InterProDNA integration
GO:0006486
IEA
InterProprotein glycosylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016757
IEA
InterProglycosyltransferase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025724 GAG-pre-integrase domain
IPR001878 Zinc finger, CCHC-type
IPR012337 Ribonuclease H-like superfamily
IPR036397 Ribonuclease H superfamily
IPR040911 Exostosin, GT47 domain
IPR001584 Integrase, catalytic core
IPR036875 Zinc finger, CCHC-type superfamily
IPR004263 Exostosin-like
IPR043502 DNA/RNA polymerase superfamily
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
Mapman id Description
35.1 not assigned.annotated