Gene: Sopen11g030890

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g030890
  • Transcript Identifier Sopen11g030890.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 66189186-66189684 : negative

Gene Family Information

  • ID HOM05D000221
  • #Genes/#Species 1858/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g030890.1

Descriptions

  • Description Probable histone H2A.3 - Medicago truncatula (Barrel medic), Encodes HTA12, a histone H2A protein. | histone H2A 12 (HTA12) | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleus, nucleosome | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone H2A , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: histone H2A 6 ., Histone-fold
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009072 Histone-fold
IPR002119 Histone H2A
IPR032454 Histone H2A, C-terminal domain
IPR007125 Histone H2A/H2B/H3
Mapman id Description
12.1.1.1 Chromatin organisation.chromatin structure.DNA wrapping.histone (H2A)