Gene: Sopen11g028790
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g028790
- Transcript Identifier Sopen11g028790.1
- Gene Type Coding gene
- Location Spenn-ch11 : 64480278-64484328 : positive
Gene Family Information
- ID HOM05D001726
- #Genes/#Species 375/98
- Phylogenetic origin
- ID ORTHO05D001761
- #Genes/#Species 359/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g028790.1
Descriptions
- Description SNF7.2 | INVOLVED IN: vesicle-mediated transport | LOCATED IN: ESCRT III complex, plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Snf7 | BEST Arabidopsis thaliana protein match is: SNF7 family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007034 | IEA | InterPro | vacuolar transport | |
| GO:0070676 | ISO | PLAZA Integrative Orthology | intralumenal vesicle formation | AT4G29160 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G19830 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010008 | ISO | PLAZA Integrative Orthology | endosome membrane | AT4G29160 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G19830 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005024 | Snf7 family |
| Mapman id | Description |
|---|---|
| 22.4.1.3.2 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.component VPS32/SNF7 |