Gene: AT2G19830
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G19830
- Transcript Identifier AT2G19830.2
- Gene Type Coding gene
- Location Chr2 : 8558101-8559389 : negative
Gene Family Information
- ID HOM05D001726
- #Genes/#Species 375/98
- Phylogenetic origin
- ID ORTHO05D001761
- #Genes/#Species 359/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G19830.2
- symbol SNF7.2
- uniprot O82197
Descriptions
- Description SNF7 family protein
- Computational description SNF7.2; INVOLVED IN: vesicle-mediated transport; LOCATED IN: ESCRT III complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT4G29160.3); Has 1789 Blast hits to 1789 proteins in 248 species: Archae - 16; Bacteria - 15; Metazoa - 681; Fungi - 406; Plants - 433; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | ISS | Gene Ontology | vesicle-mediated transport | 1 |
| GO:0006900 | IBA | Gene Ontology | vesicle budding from membrane | 2 |
| GO:0032511 | IBA | Gene Ontology | late endosome to vacuole transport via multivesicular body sorting pathway | 2 |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0007034 | IEA | GOA Database | vacuolar transport | |
| GO:0007034 | IEA | InterPro | vacuolar transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0000815 | ISS, IBA | Gene Ontology | ESCRT III complex | 2 4 |
| GO:0005771 | IBA | Gene Ontology | multivesicular body | 2 |
| GO:0009898 | IBA | Gene Ontology | cytoplasmic side of plasma membrane | 2 |
| GO:0005768 | IEA | GOA Database | endosome | |
| GO:0005886 | IDA | GOA Database | plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005024 | Snf7 family |
| Mapman id | Description |
|---|---|
| 22.4.1.3.2 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.component VPS32/SNF7 |