Gene: Sopen11g027930

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g027930
  • Transcript Identifier Sopen11g027930.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 63594938-63603292 : negative

Gene Family Information

  • ID HOM05D000112
  • #Genes/#Species 3032/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g027930.1

Descriptions

  • Description Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity. | auxin response factor 4 (ARF4) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: vegetative phase change, regulation of transcription, DNA-dependent, abaxial cell fate specification | LOCATED IN: nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation , Transcriptional factor B3 , AUX/IAA protein , Auxin response factor | BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009725
IEA
InterProresponse to hormone
GO:0010050
ISO
PLAZA Integrative Orthologyvegetative phase change AT5G60450
GO:0010158
ISO
PLAZA Integrative Orthologyabaxial cell fate specification AT5G60450

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G60450
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G60450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR010525 Auxin response factor domain
IPR044835 Auxin response factor
Mapman id Description
15.5.5.1 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)