Gene: Sopen11g025530

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g025530
  • Transcript Identifier Sopen11g025530.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 61092347-61095294 : negative

Gene Family Information

  • ID HOM05D002221
  • #Genes/#Species 302/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g025530.1

Descriptions

  • Description Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice), Thymidine kinase | FUNCTIONS IN: thymidine kinase activity, ATP binding | INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Thymidine kinase , Thymidine kinase, conserved site | BEST Arabidopsis thaliana protein match is: Thymidine kinase
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G23070
GO:0090351
ISO
PLAZA Integrative Orthologyseedling development AT5G23070
GO:0010225
ISO
PLAZA Integrative Orthologyresponse to UV-C AT3G07800
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT3G07800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004797
IEA
InterProthymidine kinase activity
GO:0005524
IEA
InterProATP binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G07800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G23070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001267 Thymidine kinase
Mapman id Description
6.3.2.1 Nucleotide metabolism.deoxynucleotides.salvage pathway.thymidine kinase (TK1)