Gene: AT3G07800

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G07800
  • Transcript Identifier AT3G07800.1
  • Gene Type Coding gene
  • Location Chr3 : 2489944-2490935 : negative

Gene Family Information

  • ID HOM05D002221
  • #Genes/#Species 302/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G07800.1
  • symbol TK1a
  • Alias AtTK1a
  • full_name thymidine kinase 1a
  • uniprot Q9S750

Descriptions

  • Description Thymidine kinase
  • Computational description Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT5G23070.1); Has 4049 Blast hits to 4037 proteins in 1500 species: Archae - 38; Bacteria - 2547; Metazoa - 142; Fungi - 7; Plants - 74; Viruses - 356; Other Eukaryotes - 885 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0016310
IEA
GOA Databasephosphorylation
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0071897
IEA
GOA DatabaseDNA biosynthetic process
GO:0009157
IEA
GOA Databasedeoxyribonucleoside monophosphate biosynthetic process
GO:0046104
IBA
Gene Ontologythymidine metabolic process1
GO:0010225
IMP, IEP
Gene Ontologyresponse to UV-C2
GO:0006302
IMP
Gene Ontologydouble-strand break repair2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004797
IEA
GOA Databasethymidine kinase activity
GO:0004797
IDA
IBA
Gene Ontologythymidine kinase activity1 3
GO:0004797
IEA
InterProthymidine kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0042802
IPI
Gene Ontologyidentical protein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001267 Thymidine kinase
Mapman id Description
6.3.2.1 Nucleotide metabolism.deoxynucleotides.salvage pathway.thymidine kinase (TK1)