Gene: Sopen11g019950
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g019950
- Transcript Identifier Sopen11g019950.1
- Gene Type Coding gene
- Location Spenn-ch11 : 46062198-46063184 : negative
Gene Family Information
- ID HOM05D006835
- #Genes/#Species 118/89
- Phylogenetic origin
- ID ORTHO05D008587
- #Genes/#Species 117/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g019950.1
Descriptions
- Description pigment defective 191 (pde191) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related | BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein .
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0008033 | ISO | PLAZA Integrative Orthology | tRNA processing | AT4G38160 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT4G38160 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003690 | IEA | InterPro | double-stranded DNA binding | |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT4G38160 |
| GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT4G38160 |
| GO:0003727 | ISO | PLAZA Integrative Orthology | single-stranded RNA binding | AT4G38160 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G38160 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G38160 |
| GO:0042651 | ISO | PLAZA Integrative Orthology | thylakoid membrane | AT4G38160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.6.2.2 | RNA biosynthesis.organelle machinery.transcriptional regulation.transcription factor (mTERF) |