Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 2.5e-75 286.6 329 100.0
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 9.4e-75 284.6 329 99.4
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 1.7e-68 263.8 318 99.1
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 7.9e-66 255.0 329 92.7
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 2.3e-65 253.4 329 93.9
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 2.6e-53 213.4 329 90.0
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 4.5e-53 212.6 329 90.0
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 2.3e-49 200.3 328 82.3
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 4.0e-49 199.5 325 69.5
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 5.2e-49 199.1 325 81.5
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 3.3e-48 196.4 320 80.0
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 3.7e-47 193.0 323 83.3
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 8.2e-47 191.8 321 83.2
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 1.1e-46 191.4 328 80.8
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.6e-45 187.6 328 75.0
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 4.5e-45 186.0 323 80.8
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 7.7e-45 185.3 328 79.6
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 1.0e-44 184.9 323 78.0
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.0e-44 184.9 326 80.4
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 1.7e-44 184.1 328 79.3
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 2.2e-44 183.7 328 80.2
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 6.5e-44 182.2 322 77.6
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.5e-43 181.0 329 81.2
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 1.5e-43 181.0 327 77.7
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 1.9e-43 180.6 329 80.2
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 1.9e-43 180.6 329 80.2
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 2.5e-43 180.3 325 63.7
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.2e-43 179.9 329 80.5
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 3.2e-43 179.9 326 80.1
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 3.2e-43 179.9 328 79.3
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 5.5e-43 179.1 328 80.2
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 1.6e-42 177.6 329 79.0
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 2.1e-42 177.2 327 77.7
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 2.1e-42 177.2 328 81.4
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 2.1e-42 177.2 328 79.9
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 2.7e-42 176.8 327 81.7
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 2.7e-42 176.8 328 74.7
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 2.7e-42 176.8 326 79.8
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 2.7e-42 176.8 328 80.2
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 1.4e-41 174.5 328 81.7
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 2.3e-41 173.7 327 77.1
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 4.0e-41 172.9 326 78.5
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 4.0e-41 172.9 328 76.2
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 4.0e-41 172.9 328 75.0
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 5.2e-41 172.6 329 75.4
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 8.8e-41 171.8 327 77.4
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 8.8e-41 171.8 328 75.3
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.2e-40 171.4 329 77.5
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.2e-40 171.4 329 77.5
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 1.2e-40 171.4 316 81.3
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 2.0e-40 170.6 329 78.4
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 3.4e-40 169.9 329 79.6
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 4.4e-40 169.5 329 77.5
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 9.8e-40 168.3 328 71.3
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 9.8e-40 168.3 326 75.5
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 1.3e-39 167.9 329 79.3
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 1.3e-39 167.9 327 76.8
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 2.2e-39 167.2 323 78.6
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 3.7e-39 166.4 328 73.5
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 4.8e-39 166.0 327 76.8
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 8.3e-39 165.2 326 78.8
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 8.3e-39 165.2 328 70.4
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.1e-38 164.9 325 76.0
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.8e-38 164.1 325 76.0
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 3.1e-38 163.3 312 82.7
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 5.4e-38 162.5 316 78.8
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 5.4e-38 162.5 321 76.9
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 5.4e-38 162.5 319 75.5
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 5.9e-37 159.1 326 76.7
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 2.9e-36 156.8 328 69.5
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 2.9e-36 156.8 326 76.1
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 3.8e-36 156.4 328 71.0
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 5.5e-35 152.5 324 72.2
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 5.5e-35 152.5 326 77.6
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 5.5e-35 152.5 367 62.1
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 1.2e-34 151.4 326 75.8
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 1.0e-33 148.3 310 77.7
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 6.8e-33 145.6 327 76.5
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 2.6e-32 143.7 329 66.9
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 7.5e-32 142.1 323 69.3
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 9.8e-32 141.7 320 44.7
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 3.7e-31 139.8 327 64.5
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 2.4e-30 137.1 328 65.2
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 4.1e-30 136.3 328 69.2
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 7.8e-29 132.1 327 63.9
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 7.8e-29 132.1 86 70.9
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 1.0e-28 131.7 327 70.6
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 2.3e-28 130.6 88 70.5
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 2.9e-28 130.2 80 80.0
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 8.6e-28 128.6 87 70.1
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 1.1e-27 128.3 323 63.5
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.1e-27 128.3 327 64.8
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 1.5e-27 127.9 319 64.9
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 4.3e-27 126.3 315 54.9
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 8.0e-26 122.1 329 67.2
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 8.0e-26 122.1 329 67.2
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 1.0e-25 121.7 329 67.2
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 1.0e-25 121.7 329 67.5
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 8.9e-25 118.6 280 80.4
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 1.5e-24 117.9 75 66.7
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 2.9e-23 113.6 297 75.8
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 7.0e-22 109.0 86 58.1
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.6e-21 107.8 321 42.1
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.5e-21 106.7 64 76.6
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 4.3e-19 99.8 325 58.2
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.3e-17 94.0 319 68.7
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 5.2e-17 92.8 319 67.7
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 8.9e-17 92.0 59 69.5
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 3.4e-16 90.1 57 68.4
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.6e-13 81.3 60 56.7
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 2.7e-13 80.5 58 62.1
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 5.6e-11 72.8 74 45.9
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 5.6e-11 72.8 90 43.3
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.5e-08 64.7 88 44.3
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 4.4e-08 63.2 40 67.5
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 1.1e-06 58.5 59 47.5
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 4.1e-06 56.6 58 44.8
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 4.1e-06 56.6 42 57.1
Cc07_g21430 Coffea canephora HOM05D005956 ORTHO05D007197 7.1e-06 55.8 59 40.7
SMO353G0202 Selaginella moellendorffii HOM05D006835 ORTHO05D001299 7.1e-06 55.8 59 49.2


User provided reference genes

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