Gene: Sopen11g014300
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g014300
- Transcript Identifier Sopen11g014300.1
- Gene Type Coding gene
- Location Spenn-ch11 : 24544774-24545482 : positive
Gene Family Information
- ID HOM05D000806
- #Genes/#Species 732/82
- Phylogenetic origin
- ID ORTHO05D002324
- #Genes/#Species 297/70
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g014300.1
Descriptions
- Description Apocytochrome f precursor - Atropa belladonna (Belladonna) (Deadly nightshade), Encodes cytochrome f apoprotein | involved in photosynthetic electron transport chain | encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2. | photosynthetic electron transfer A (PETA) | FUNCTIONS IN: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | INVOLVED IN: photosynthetic electron transport in cytochrome b6/f | LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cytochrome f , Rudiment single hybrid motif .
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0015979 | IEA | InterPro | photosynthesis | |
GO:0009767 | ISO | PLAZA Integrative Orthology | photosynthetic electron transport chain | ATCG00540 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005506 | IEA | InterPro | iron ion binding | |
GO:0009055 | IEA | InterPro | electron transfer activity | |
GO:0020037 | IEA | InterPro | heme binding | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00540 |
GO:0045158 | ISO | PLAZA Integrative Orthology | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | ATCG00540 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0031361 | IEA | InterPro | integral component of thylakoid membrane | |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00540 |
GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | ATCG00540 |
GO:0009512 | ISO | PLAZA Integrative Orthology | cytochrome b6f complex | ATCG00540 |
GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | ATCG00540 |
GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | ATCG00540 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |